Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933456.1_cds_XP_016479744.1_71255
CDS Infomation

[gene=LOC107800994] [db_xref=GeneID:107800994] [protein=putative UPF0481 protein At3g02645] [protein_id=XP_016479744.1] [location=complement(join(52038..53195,53241..53690))] [gbkey=CDS]
Sequence

ATGGCCTCAAACTGCAATACTAATTCAAACTTCGATGAGAGTCGATGGGTTATTCAAATC
CGTCGAACACTTGACGAAGAACTTGAAGAAGATACTGAAATTCCAGTTAGCATTTTCAAC
GTCCCAAAAGCTCTACTGTTGAGCGATCAAGATTCATACGTGCCACAAGTAGTGGCAATA
GGCCCATACCATTATTGGCGTACAGAACTGCATGATATGGAAAGGTACAAATTAGCTGCT
GCAAAAATAACTCAGAAACAGCTCCAAAGTCTCAAATTCCAGCATCTTGTGGAACAGCTG
ATAAATTTTGAGCACAGAATTCGTTGTTCGTACCATAAGTATTTGAATTTCAATGAGGAA
ACTTTGGCCTGGATGATGGCTGTAGACGCCTCTTTCTTGCTCGAGTTCCTTCAAATCTAC
GCGATTAGAGAAGGTAAAATTCTAACTAGATCCGCGCATAATGCCATTCTTAGAGATTTA
ATTATGCTTGAAAACCAAATCCCGTTATTTATATTAAGGAAAATGTTGGAATTCCAGTTT
TCATCTTTAGAGTTGGCAGATAACATGCTGGTGTGTATTCTAACGGGGTTCTGTAAAGAG
CTTTCTCCTTTCCAAATGGTAGATGATTTCCCAATAATTCAAATCACAGAATGTGTTCAT
TTGCTGGACTTTTTGTACCAATTTATCGTGCCCAAATTAGAAGGAACTTCTGAAATAACA
AAAGATGATCACGAGCAAACAGATGCCAACCAAGTCGAAAATAGTAATTTCGTTGGGAAA
TCAAGTCATATCGGACAACTTATTAATGAAATCTGGAAAATCCTTGTGAAAATAAACAGA
GGCCCGGTACGTCTTCTTAAGAGAATAGTATTTTCAAGACCAGTTAAACTCATGTTTAAG
CTGCCTTGGAAATTCATTTCTAATCTTCCTGGAATAAAACTTTTTATACTACCTATTACA
TATATGTTCTTTTCTCAAGAAAAAGCAGAAGTAAATTCTGAAACTAATATCAATAAACCC
CCTCTGTTTGAAGAAATAGCCATCCCATCAGTTACTGAACTTTCTAAAGCCGGAGTCAGT
TTTGTAGCAACCAATGCTGGAATCATGAGCATAAATTTCGACGATAAAAAGATGAAATTT
TATTTGCCTACAGTCAGTCTAGACGTAAACACAAAGGTCATTTTGAGGAATTTAGTTGCA
TACGAAGCATGTAATGCATCAGGGCCTTTAGTTTTTACACGTTACACTGAATTAATGAAC
GGGATTATTGATACAGAAGAGGATGCTTTGTTACTTAGGGAAAAAGGAATAATATTGAAC
CGTTTGAAGAGTGATAAAGAGGTTGCAAACTTGTGGAATGGGATGAGTAGATCGTTGAGA
TTAACTAAAGTGCAGTTCTTGGATAAAGTGATTGAAGATGTGAATGGATTTTACAATGCA
AGATGGAATATTAAGACTGGAAAAATGATGAAGCATTATGTTTTTGGGTCATGGCAAGTT
CTCACATTCTTGGCTTGTATTATGCTCTTAATGTTGATGACTTTACAAGCATTTTGTTCA
GTCTATAAATGTGCTCGTATATTTCATATTCAGAATTCTGATGACTGA

Peptide Sequence

PEP ID

XP_016479744.1
PEP Infomation

PREDICTED: putative UPF0481 protein At3g02645 [Nicotiana tabacum]
Sequence

MASNCNTNSNFDESRWVIQIRRTLDEELEEDTEIPVSIFNVPKALLLSDQDSYVPQVVAI
GPYHYWRTELHDMERYKLAAAKITQKQLQSLKFQHLVEQLINFEHRIRCSYHKYLNFNEE
TLAWMMAVDASFLLEFLQIYAIREGKILTRSAHNAILRDLIMLENQIPLFILRKMLEFQF
SSLELADNMLVCILTGFCKELSPFQMVDDFPIIQITECVHLLDFLYQFIVPKLEGTSEIT
KDDHEQTDANQVENSNFVGKSSHIGQLINEIWKILVKINRGPVRLLKRIVFSRPVKLMFK
LPWKFISNLPGIKLFILPITYMFFSQEKAEVNSETNINKPPLFEEIAIPSVTELSKAGVS
FVATNAGIMSINFDDKKMKFYLPTVSLDVNTKVILRNLVAYEACNASGPLVFTRYTELMN
GIIDTEEDALLLREKGIILNRLKSDKEVANLWNGMSRSLRLTKVQFLDKVIEDVNGFYNA
RWNIKTGKMMKHYVFGSWQVLTFLACIMLLMLMTLQAFCSVYKCARIFHIQNSDD

Transcript Sequence

Gene sequence data has not been registered.